sci-biology/
tophat

Python-based splice junction mapper for RNA-Seq reads using bowtie2

https://ccb.jhu.edu/software/tophat/

Available Versions

Version amd64 x86 alpha arm arm64 hppa ia64 ppc ppc64 sparc
2.1.1-r5 : 0 ~amd64 ~x86 ?alpha ?arm ?arm64 ?hppa ?ia64 ?ppc ?ppc64 ?sparc
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Package Metadata

Masks

  • Upstream declared EOL, py2 only, use sci-biology/STAR as modern replacement. Removal in 30 days.
    sci-biology/tophat
    David Seifert <soap@gentoo.org> (2020-01-28)

Changelog