All packages

blis BLAS-like Library Instantiation Software Framework
cddlib C implementation of the Double Description Method of Motzkin et al
lapack BLAS,CBLAS,LAPACK,LAPACKE reference implementations
fflas-ffpack Library for dense linear algebra over word-size finite fields
atlas Automatically Tuned Linear Algebra Software
Fiona OGR's neat, nimble, no-nonsense API
Rtree R-Tree spatial index for Python GIS
arpack Arnoldi package library to solve large scale eigenvalue problems
arprec Arbitrary precision float arithmetics and functions
Shapely Geometric objects, predicates, and operations
adolc Automatic differentiation system for C/C++
avogadrolibs Advanced molecule editor and visualizer 2 - libraries
beagle Open BEAGLE, a versatile EC/GA/GP framework
amd Library to order a sparse matrix prior to Cholesky factorization
armadillo Streamlined C++ linear algebra library
bmrblib API abstracting the BioMagResBank (BMRB) NMR-STAR format
cartopy Python package for geospatial data processing and analysis
btf Algorithm for matrix permutation into block triangular form
buddy Binary Decision Diagram Package
camd Library to order a sparse matrix prior to Cholesky factorization
cblas-reference C wrapper interface to the F77 reference BLAS implementation
ccfits C++ interface for cfitsio
cdd+ Another implementation of the double description method
cantera Object-oriented tool suite for chemical kinetics, thermodynamics, and transport
bliss Compute Automorphism Groups and Canonical Labelings of Graphs
brial A C++ library for polynomials over boolean rings
ccolamd Constrained Column approximate minimum degree ordering algorithm
clblast Tuned OpenCL BLAS
ceres-solver Nonlinear least-squares minimizer
cfitsio C and Fortran library for manipulating FITS files
cgcode Conjugate gradient Codes for large sparse linear systems
coinor-dylp COIN-OR using the dynamic simplex linear programming solver
cifparse-obj Provides an object-oriented application interface to information in mmCIF format
clapack f2c'ed version of LAPACK
clashscore-db Clashscore-db for clashlist
cgnslib CFD General Notation System standard library
clblas Library containing BLAS routines for OpenCL
chemkit Library for chemistry applications
cdf Common Data Format I/O library for multi-dimensional data sets
cholmod Sparse Cholesky factorization and update/downdate library
cln Class library (C++) for numbers
cmpfit MINPACK-1 Least Squares Fitting Library in C
coinhsl HSL mathematical software library for IPOPT
coinor-alps COIN-OR Framework for implementing parallel graph search algorithms
coinor-bcps COIN-OR BiCEPS data handling library
coinor-cgl COIN-OR cutting-plane generators library
coinor-couenne COIN-OR Convex Over and Under ENvelopes for Nonlinear Estimation
coinor-bonmin COIN-OR Basic Open-source Nonlinear Mixed INteger programming
coinor-cbc COIN-OR Branch-and-Cut Mixed Integer Programming Solver
coinor-clp COIN-OR Linear Programming solver
coinor-cppad COIN-OR C++ Algorithmic Differentiation
libtifiles2 Library for TI calculator files
coinor-bcp COIN-OR Branch-Cut-Price Framework
coinor-blis COIN-OR BiCePS Linear Integer Solver
dcmtk The DICOM Toolkit
coinor-netlib COIN-OR netlib models
coinor-vol COIN-OR Volume algorithm linear programming solver
coinor-osi COIN-OR Open Solver Interface
cxsparse Extended sparse matrix package
coinor-symphony COIN-OR solver for mixed-integer linear programs
coinor-utils COIN-OR Matrix, Vector and other utility classes
colamd Column approximate minimum degree ordering algorithm
colpack C++ algorithms for specialized vertex coloring problems
cqrlib Utility library for quaternion arithmetic / rotation math (ANSI C implemented)
deap Distributed Evolutionary Algorithms in Python
coinor-os COIN-OR Optimization Services
dealii Solving partial differential equations with the finite element method
coinor-sample COIN-OR Sample models
coinor-mp COIN-OR lightweight API for COIN-OR libraries CLP, CBC, and CGL
ipopt Interior-Point Optimizer for large-scale nonlinear optimization
gdal Translator library for raster geospatial data formats (includes OGR support)
dlib Numerical and networking C++ library
dmlc-core Common bricks library for building distributed machine learning.
fftw Fast C library for the Discrete Fourier Transform
flann Fast approximate nearest neighbor searches in high dimensional spaces
symmetrica C library for representation theory, combinatorics, and more
gaul-devel Genetic Algorithm Utility Library
fplll Different implementations of the floating-point LLL reduction algorithm
galib Library for genetic algorithms in C++ programs
eccodes A set of encoding/decoding APIs and tools for WMO GRIB, BUFR, and GTS messages
exodusii Model developed to store and retrieve transient data for finite element analyses
fcl The Flexible Collision Library
gamer Geometry-preserving Adaptive MeshER
ignition-math A small, fast, and high performance math library for robot applications
idlcoyote GDL library from D. Fannings IDL courses
getdata Reference implementation of the Dirfile, format for time-ordered binary data
hdf General purpose library and format for storing scientific data
gts GNU Triangulated Surface Library
hdf5 General purpose library and file format for storing scientific data
givaro C++ library for arithmetic and algebraic computations
h5hut High-Performance I/O Library for Particle-based Simulations
indilib INDI Astronomical Control Protocol library
gmsh A three-dimensional finite element mesh generator
h5part Portable High Performance Parallel Data Interface to HDF5
idlmarkwardt Craig Markwardt IDL procedures (MPFIT, CMSVLIB, etc)
gerris Gerris Flow Solver
io_lib General purpose trace and experiment file reading/writing interface
iml Integer Matrix Library
htslib C library for high-throughput sequencing data formats
hypre Parallel matrix preconditioners library
inchi Program and library for generating standard and non-standard InChI and InChIKeys
libbufr ECMWF BUFR library - includes both C and Fortran example utilities
libaec Adaptive Entropy Coding library
klu Sparse LU factorization for circuit simulation
lapack-reference FORTRAN reference implementation of LAPACK Linear Algebra PACKage
lemon C++ template static library of common data structures and algorithms
keras-applications Keras deep learning library reference implementations of deep learning models
kim-api Application Programming Interface for atomistic simulations
libcerf Efficient and accurate implementation of complex error functions
libcmatrix lite version of pNMRsim
jama Java-like matrix C++ templates
levmar Levenberg-Marquardt nonlinear least squares C library
keras-preprocessing Easy data preprocessing and data augmentation for deep learning models
libbraiding Expose the functionality of cbraid as a shared library
libccd Library for collision detection between two convex shapes
libsc Support for parallel scientific applications
libh2o Library of routines for IF97 water & steam properties
libgeotiff Library for reading TIFF files with embedded tags for geographic information
libghemical Chemical quantum mechanics and molecular mechanics
libmems Library for sci-biology/mauve
libmuscle Library for sci-biology/mauve
libnova Celestial Mechanics and Astronomical Calculation Library
libpdb++ PDB Record I/O Libraries -- c++ version
libpdb PDB Record I/O Libraries -- c version
libqalculate A modern multi-purpose calculator library
libh2oxx C++ bindings for libh2o
libsigrok basic hardware drivers for logic analyzers and input/output file format support
libsigrokdecode provide (streaming) protocol decoding functionality
libspatialindex General framework for developing spatial indices
libsvm Library for Support Vector Machines
libticables2 Library to handle different link cables for TI calculators
libticalcs2 Library for communication with TI calculators
libticonv Charset conversion library for TI calculators
liborigin Library for reading OriginLab OPJ project files
libexcelformat reading, writing, and editing of XLS (BIFF8 format) files using C++
libgenome Library for sci-biology/mauve
libint Matrix elements (integrals) evaluation over Cartesian Gaussian functions
mkl-rt Intel Math Kernel Library (Runtime)
med Modeling and Exchange of Data library
mc 2D/3D AFEM code for nonlinear geometric PDE
m4ri Method of four russian for inversion (M4RI)
metis A package for unstructured serial graph partitioning
lmfit library for Levenberg-Marquardt least-squares minimization and curve fitting
m4rie Fast dense matrix arithmetic over GF(2^e) for 2 <= e <= 16
mathgl Math Graphics Library
minfx Numerical optimisation library
minuit A C++ physics analysis tool for function minimization
lrslib Self-contained C implementation of the reverse search algorithm
linux-gpib-modules Kernel modules for GPIB (IEEE 488.2) hardware
magma Matrix Algebra on GPU and Multicore Architectures
matio Library for reading and writing matlab files
o2scl Object-oriented Scientific Computing Library
mumps MUltifrontal Massively Parallel sparse direct matrix Solver
neartree Function library efficiently solving the Nearest Neighbor Problem
netcdf-cxx C++ library for netCDF
oc Network Data Access Protocol client C library
netcdf Scientific library and interface for array oriented data access
nfft library for nonequispaced discrete Fourier transformations
nlopt Non-linear optimization library
numkit Numerical first aid kit (with numpy/scipy)
nanoflann C++ header-only library for Nearest Neighbor (NN) search wih KD-trees
netcdf-fortran Scientific library and interface for array oriented data access
mpir Library for arbitrary precision integer arithmetic (fork of gmp)
nemesis Enhancement to the EXODUSII finite element database model
pastix Parallel solver for very large sparse linear systems
p4est Scalable Algorithms for Parallel Adaptive Mesh Refinement on Forests of Octrees
opencascade Development platform for CAD/CAE, 3D surface/solid modeling and data exchange
orocos_kdl Kinematics and Dynamics Library (KDL)
pcl 2D/3D image and point cloud processing
proj Proj.4 cartographic projection software
oce Development platform for CAD/CAE, 3D surface/solid modeling and data exchange
profnet Neural network architecture for profacc
profphd-utils Additional utils for profphd
parmetis Parallel (MPI) unstructured graph partitioning library
primegen Small, fast library to generate primes in order
openblas Optimized BLAS library based on GotoBLAS2
ogdi Open Geographical Datastore Interface, a GIS support library
orocos-bfl Bayesian Filtering Library
pgplot FORTRAN/C device-independent scientific graphic library
plotmm Plot widget for GTKmm
pyshp Pure Python read/write support for ESRI Shapefile format
qrupdate Library for updating of QR and Cholesky decompositions
qfits ESO stand-alone C library offering easy access to FITS files
scalapack Subset of LAPACK routines redesigned for heterogenous (MPI) computing
rosetta-db Essential database for rosetta
rosetta-fragments Fragment library for rosetta
rtabmap Real-Time Appearance-Based Mapping (RGB-D Graph SLAM)
scikits Common files for python scikits
scikits_image Image processing routines for SciPy
scikits_learn Machine learning library for Python
scikits_optimization Python module for numerical optimization
scikits_timeseries SciPy module for manipulating, reporting, and plotting time series
scotch Software for graph, mesh and hypergraph partitioning
scipy Scientific algorithms library for Python
shapelib Library for manipulating ESRI Shapefiles
qd Quad-double and double-double float arithmetics
pycifrw Provides support for reading and writing of CIF using python
scipy-python2 Scientific algorithms library for Python (py2 version)
superlu_mt Multithreaded sparse LU factorization library
symengine Fast symbolic manipulation library, written in C++
spglib Spglib is a C library for finding and handling crystal symmetries
superlu Sparse LU factorization library
silo A mesh and field I/O library and scientific database
spr Statistical analysis and machine learning library
suitesparseconfig Common configurations for all packages in suitesparse
spqr Multithreaded multifrontal sparse QR factorization library
sundials Suite of nonlinear solvers
tensorflow-estimator A high-level TensorFlow API that greatly simplifies machine learning programming
tamu_anova ANOVA Extensions to the GNU Scientific Library
vtk The Visualization Toolkit
ufconfig Common configuration scripts for the SuiteSparse libraries
voro++ A 3D Voronoi cell software library
votca-tools Votca tools library
xdmf2 eXtensible Data Model and Format
xdrfile Library to read gromacs trajectory and topology files
xgks-pmel PMEL fork of XGKS, an X11-based version of the ANSI Graphical Kernel System
xkaapi Kernel for Adaptative, Asynchronous Parallel and Interactive programming
xylib Experimental x-y data reading library
trilinos Scientific library collection for large scale problems
tnt Template Numerical Toolkit: C++ headers for array and matrices
udunits Library for manipulating units of physical quantities
ta-lib Technical Analysis Library for analyzing financial markets trends
tensorflow Computation framework using data flow graphs for scalable machine learning
umfpack Unsymmetric multifrontal sparse LU factorization library
cminpack C implementation of the MINPACK nonlinear optimization library
coinor-csdp COIN-OR C Library for Semi-Definite Programming
blas-reference Basic Linear Algebra Subprograms F77 reference implementations
cbflib Library providing a simple mechanism for accessing CBF files and imgCIF files
ldl Simple but educational LDL^T matrix factorization algorithm
libdap Implementation of a C++ SDK for DAP 2.0 and 3.2
lis Library of Iterative Solvers for Linear Systems
djbfft Extremely fast library for floating-point convolution
dsdp Software for interior-point for semidefinite programming
geos Geometry engine library for Geographic Information Systems
itpp C++ library of mathematical, signal processing and communication
linux-gpib Driver library for GPIB (IEEE 488.2) hardware
plplot Multi-language scientific plotting library
punc Portable Understructure for Numerical Computing
octomap An Efficient Probabilistic 3D Mapping Framework Based on Octrees
openlibm High quality system independent, open source libm
szip Extended-Rice lossless compression algorithm implementation
shogun Large Scale Machine Learning Toolbox
suitesparse Metapackage for a suite of sparse matrix tools
alglib Numerical analysis and data processing library
ViSP Visual Servoing Platform: visual tracking and visual servoing library
fetk The Finite Element ToolKit - Meta package
gsl The GNU Scientific Library
coinor-dip COIN-OR Decomposition in Integer Programming library
coinor-flopcpp COIN-OR algebraic modeling language for linear optimization
coinor-smi COIN-OR Stochastic modelling interface
libgeodecomp An auto-parallelizing library to speed up computer simulations
mpfi Multiple precision interval arithmetic library based on MPFR
taucs C library of sparse linear solvers
mkl Intel(R) Math Kernel Library: linear algebra, fft, math functions
libxc A library of exchange-correlation functionals for use in DFT